Preclinical WebsiteClinical Website
Last Updated: September 19, 2025
Authors: Alexa Brown, Ph.D. and Barry J. Bedell, M.D., Ph.D.

Introduction

The AAV-TDP-43ΔNLS model expresses a cytoplasmically mislocalized form of human TDP-43, mimicking key pathological features seen in ALS. This includes phosphorylated TDP-43 (pTDP-43) aggregation, neuroinflammation, mitochondrial abnormalities, and motor deficits (Suk, 2020; Bright, 2021). Microscopy images presented here illustrate hallmark features of ALS-like pathology in this model. 

Developed to provide flexibility in experimental design, this model enables controlled, region-specific targeting using AAV-based delivery. Moreover, this model can be rapidly established, facilitating faster study timelines for evaluating potential disease-modifying therapies.

This model is generated by unilaterally injecting 10-12-week-old C57BL/6 mice with either AAV-hTDP-43ΔNLS or AAV-Null (control) vectors into either the left motor cortex or the left substantia nigra pars compacta (SNc).

Image Interactive

This Story Panel in this interactive experience will guide you through our research project. You can also freely explore the high-resolution multiplex immunofluorescence tissue sections in the Image Viewer.

Toxic Loss & Gain of Function in a New TDP-43ΔNLS ALS Mouse Model

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This Interactive Presentation provides an overview of the motor and pathologic features of Biospective’s AAV-hTDP43ΔNLS mouse model, which uses an adeno-associated virus (AAV) to express human TDP-43 (hTDP-43) lacking its nuclear localization signal (ΔNLS).

Developed to provide flexibility in experimental design, this model enables controlled, region-specific targeting using AAV-based delivery. Moreover, this model can be rapidly established, facilitating faster study timelines for evaluating potential disease-modifying therapies.

This model is generated by unilaterally injecting 10-12 week old C57BL/6 mice with either AAV-hTDP43ΔNLS or AAV-Null (control) vectors into the left substantia nigra pars compacta (SNc).

https://ispproductionpubic.blob.core.windows.net/media/5f993de6-8ef1-45b9-8703-8577f4bfde20/5f993de6-8ef1-45b9-8703-8577f4bfde20

Coronal View of SNc Injection Site

These multiplex immunofluorescence (mIF) images were generated by immunostaining for TH, hTDP-43, pTDP-43, ATP5A, GFAP, Iba-1, and counterstained with DAPI nuclear stain. Tissue sections were digitized using a high-throughput slide scanner.

To navigate through this Image Story, you can use the arrows and/or the Table of Contents icon in the upper right corner of this panel.

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You can also interact with the microscopy image in the viewer on the right at any time to further explore this high-resolution data.

AAV-hTDP43ΔNLS Expression in SNc and Midbrain

The SNc has an established role in motor control, making it a practical site for inducing and assessing motor dysfunction. Evidence indicates that phosphorylated TDP-43 (pTDP-43) pathology appears in the SNc at Braak stage 2, suggesting early involvement in ALS (Braak, 2013).

Extrapyramidal involvement in ALS can contribute to symptoms such as rigidity, postural instability, and balance problems (Desai, 1999; Pradat, 2009).

Model illustrating the spatiotemporal progression of TDP-43 pathology in the human ALS brain. Adapted from (Braak, 2013).

In this model, the AAV-hTDP43ΔNLS is controlled by a neuron-specific promoter. As shown in the photomicrograph, there is significant hTDP-43 expression in the targeted ipsilateral SNc and midbrain. For reference, an illustration with atlas labels for these brain regions is provided below.

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Coronal Mouse Brain Section (Bregma -3.2 mm) with Neuroanatomical Labels

ΔNLS Promotes Cytoplasmic Mislocalization of hTDP-43

This micrograph shows the cytoplasmic mislocalization of hTDP-43 resulting from the deletion of its nuclear localization signal (ΔNLS). The model was designed to replicate a hallmark feature of ALS pathology, where TDP-43 undergoes mislocalization from the nucleus to the cytoplasm, leading to the formation of cytoplasmic inclusions.

This video toggles the hTDP-43 and DAPI channels on and off to clearly visualize the spatial localization of hTDP-43.

hTDP-43 Accumulation in Dopaminergic Neurons of the SNc

This microscopy image of the SNc in the targeted hemisphere shows hTDP-43 deposition within tyrosine hydroxylase (TH)-positive neurons. TH expressing cell bodies and processes are labeled in red, while hTDP-43 appears in green.

Colocalization of hTDP-43 with TH-positive neurons suggests a potential link between TDP-43 pathology and the motor deficits observed in this model, despite the absence of substantial dopaminergic cell loss. These findings suggest a functional impairment, rather than degeneration, of the SNc, likely driven by a toxic loss of function of TDP-43 in the nucleus.

Cylinder Test data comparing AAV-TDP43 to AAV-Null (control); mean ± SEM, t-test *** p<.001.

Tail Swing Suspension Test (TSST) and Hindlimb Clasping data comparing AAV-TDP43 to AAV-Null (control); mean ± SEM, multiple comparisons **** p<0.0001.

Using our PERMITS quantitative analysis software, we have quantified the TH staining in the SNc. The plot below shows no significant difference in the ipsilateral hemisphere of the AAV-hTDP43 compared to the AAV-null (control) mice.

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SNc TH stain density for AAV-hTDP43 compared AAV-null (control) injections; mean ± SEM.

Microgliosis in Response to hTDP-43

The boxed region highlights a marked increase in microglia, visualized by Iba-1 staining, within the targeted hemisphere compared to the contralateral side. This elevated density suggests a localized neuroinflammatory response to hTDP-43 accumulation.

The plot below shows the Iba-1 stain density in the ipsilateral hemisphere of the SNc.

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SNc Iba-1 stain density for AAV-hTDP43 compared to AAV-null (control) injections; mean ± SEM, t-test, **p<0.01.

Iba-1 Staining in Proximity to hTDP-43

Increased microglial density in the SNc and midbrain of the targeted hemisphere is localized in proximity to hTDP-43 accumulation, suggesting that the microglial response may be linked to the buildup of hTDP-43.

Astrogliosis & hTDP-43 Pathology

An increased density of GFAP-stained astrocytes is observed within the targeted hemisphere, particularly in the SNc and midbrain, as indicated by the boxed region. The plot below shows the GFAP stain density in the ipsilateral hemisphere of the SNc.

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SNc GFAP stain density for AAV-hTDP43 compared to AAV-null (control) injections; mean ± SEM, t-test, *p<0.05.

GFAP Staining in Proximity to hTDP-43

A higher density of GFAP-stained astrocytes is observed in regions adjacent to hTDP-43 accumulation.

pTDP-43 Expression in the Midbrain

Phosphorylated TDP-43 (pTDP-43) represents a pathological, disease-associated form of the protein,

A sparse distribution of pathological pTDP-43 aggregates is observed in the midbrain of the targeted, ipsilateral hemisphere at this stage of the disease progression.

Cytoplasmic pTDP-43 Aggregates in the Midbrain

In this high-magnification image, pTDP-43 is mislocalized to the cytoplasm. DAPI staining marks cell nuclei, while pTDP-43 shows well-defined cytoplasmic inclusions. Although pTDP-43 aggregates in the midbrain are sparse, mice nonetheless exhibited significant behavioral deficits, suggesting that even limited mislocalization of pTDP-43 in this region may be sufficient to impair normal functioning.

Unilateral AAV-hTDP43ΔNLS Injection in the Motor Cortex

In a separate group of mice, a similar AAV-based approach was used to express hTDP43ΔNLS, this time through unilateral injection into the motor cortex.

In this microscopy image of the motor cortex, robust expression and mislocalization of pTDP-43 is evident, compared to the relatively sparse aggregation in the SNc or midbain. The increased pTDP-43 expression observed in the motor cortex suggests a region-specific vulnerability to TDP-43 pathology, which is particularly relevant given the well-established role of the motor cortex in ALS.

Cortical Mitochondrial Morphology

Mitochondrial dysfunction is a hallmark of several neurodegenerative diseases, including ALS. In this study using our AAV-based delivery of hTDP43-ΔNLS, ATP5A staining reveals punctate structures, consistent with dilated mitochondria in the motor cortex. This observation underscores the contribution of mitochondrial alterations to ALS pathophysiology and highlights the motor cortex as a particularly vulnerable region.

Summary

This novel AAV-hTDP43ΔNLS mouse model mirrors key pathological features of ALS, including the development of motor deficits and associated colocalization of hTDP-43 with TH-expressing neurons in the SNc. Importantly, hTDP-43 mislocalizes from the nucleus to the cytoplasm, resulting from the deletion of its nuclear localization signal (ΔNLS).

Dopaminergic cell death in the SNc is minimal, suggesting neuronal dysfunction, rather than neurodegeneration. Further, microglial and astrocyte densities in the SNc and midbrain are elevated, suggesting a link between TDP-43 accumulation and neuroinflammation.

This AAV-based model is well-suited for drug development and possesses distinct advantages, such as enabling region-specific targeting. Moreover, it can be rapidly established, making it an efficient model for screening novel treatment options targeting TDP-43-related pathology.

Further studies are planned to continue to investigate the range and progression of pathological changes in the model, and to further characterize the changes observed in motor cortex-injected mice. Our preliminary findings indicate a region-specific vulnerability of the motor cortex to pTDP-43 cytoplasmic aggregation and alterations of mitochondrial structure (and potentially function).

Please feel free to further explore the microscopy image in the viewer.

We would be happy to discuss this model and our characterization if you would like to Contact Us.

Table of Contents
Control Panel
Section: Coronal Brain
Channels

Key Assays used in this Research Project

Summary of some of the key behavioral and histological methods used to assess pathology in our AAV-TDP-43ΔNLS mouse model.

Behavioral Assays 

Assay

Description

TSST (Tail Suspension Swing Test)

Measures motor asymmetry by counting lateral swings when suspended by the tail

Cylinder Test

Assesses forelimb use asymmetry during spontaneous rearing

Clasping Test

Detects hindlimb clasping, a marker of neurodegeneration

 

Histological Assays

Technique

Description

IHC (Immunohistochemistry)

Labels specific proteins in tissue sections
Markers include: hTDP-43, pTDP-43, TH, GFAP, Iba-1 & ATP5A

Multiplex Immunofluorescence

Detects multiple markers in the same section for high-resolution co-localization

Would you like to contribute your own research to this Open Microscopy Initiative?

FAQs

What is the AAV-TDP-43ΔNLS model?


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What are the advantages of the AAV-TDP-43ΔNLS model compared to other ALS models? 


Why is TDP-43ΔNLS used to model ALS pathology?


How is the AAV delivered and where is it injected?


References


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